Signature	SharedGeneNum	SharedGenes	AvgPval	BreastC_M4 Ribosome_UniqueNum	BreastC_M4 Ribosome_pVal	BreastC_M4 Ribosome_Unique	ColonC_M6 Chr6p21-25_UniqueNum	ColonC_M6 Chr6p21-25_pVal	ColonC_M6 Chr6p21-25_Unique
BENPORATH_MYC_MAX_TARGETS	0		1.0553836965e-05	19	4.1363692663e-08	AP4S1|EIF3K|RPL9|RPL15|RPL18|RPL27|RPL31|RPL35|RPL37|RPLP1|RPS5|RPS6|RPS13|RPS17|RPS19|RPS25|RPS27A|RPS29|UBXN1	17	2.10663102373e-05	ABT1|CUTA|DAXX|EEF1E1|GLT8D1|HIST1H4I|HTRA2|MED20|NOL7|NUP153|PEX6|POLR1C|RGL2|RNASET2|RXRB|WDR46|ZNRD1
CAIRO_HEPATOBLASTOMA_CLASSES_UP	0		2.27263130533e-06	24	2.78293024259e-14	C6ORF48|CCNB1IP1|EEF1B2|EIF3F|EIF3L|EIF4B|FBL|IMPDH2|RPL6|RPL10A|RPL11|RPL14|RPL15|RPL18|RPL18A|RPL22|RPL24|RPL28|RPS3|RPS6|RPS9|RPS14P3|RPS16|RSL1D1	16	4.54526258284e-06	AGBL5|BYSL|CLIC1|CSNK2B|EEF1E1|HTRA2|LSM2|LYRM4|MRPS18B|MRS2|NELFE|NOL7|NUP153|POLR1C|RPP40|WDR46
GGAANCGGAANY_UNKNOWN	0		1.80189823247e-05	6	2.78854459148e-05	COMMD6|EIF3K|RPL28|SEC11A|UBA52|UBXN1	7	8.15251873455e-06	BAG6|COX7A2|CSNK2B|GPANK1|MRPS18A|PEX6|TRIM39
GSE17721_CTRL_VS_POLYIC_8H_BMDC_UP	0		0.000443643023042	6	0.000808008952817	EIF3F|FAU|RPL12|RPLP1|RPS15A|UBXN1	8	7.92770932673e-05	CCDC167|CLIC1|CUTA|DHX16|RGL2|RNF5|RXRB|TRIM39
Human Viral_Cairo08_982genes (19061838-TableS7)	0		8.51943147503e-05	24	1.52475951223e-11	C6ORF48|CCNB1IP1|EIF3F|EIF3L|EIF4B|FBL|IMPDH2|RPL6|RPL10A|RPL11|RPL14|RPL15|RPL18|RPL18A|RPL22|RPL24|RPL28|RPLP0|RPS3|RPS6|RPS9|RPS14|RPS16|RSL1D1	16	0.000170388614253	AGBL5|BYSL|CLIC1|CSNK2B|EEF1E1|HTRA2|LSM2|LYRM4|MRPS18B|MRS2|NELFE|NOL7|NUP153|POLR1C|RPP40|WDR46
Mouse Lymphoma_Wu08_1114genes (18535662-TableS1b)	0		0.000385760657277	14	7.0799153377e-07	CDC26|EEF1G|EIF3F|EIF3G|EIF3K|FBL|IMPDH2|RPL6|RPL10A|RPL11|RPL22|RPL35A|RPS25|TOMM7	11	0.00077081332302	ABCF1|CDC5L|COX7A2|KDM1B|MRPL53|NOL7|PFDN6|POLE4|PPIL1|SLC29A1|WDR46
RNA processing [GoID:GO:0006396; evidenceTypes:EXP|IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		5.9613205121e-06	47	1.44915034882e-34	FBL|METTL2B|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	19	1.19226410242e-05	ABT1|BYSL|CDC5L|CMTR1|DHX16|FARS2|GTF2H4|LSM2|NELFE|PPIL1|RIOK1|RPL7L1|RPP21|RPP40|RRP36|SF3B5|SNRNP48|SNRPC|WDR46
intracellular ribonucleoprotein complex [GoID:GO:0030529; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	0		6.1227266248e-07	50	1.55370870899e-41	EEF2|EIF4B|FBL|RPL6|RPL9|RPL10A|RPL10L|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL36A-HNRNPH2|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	19	1.22454532496e-06	ABCF1|CDC5L|DHX16|LSM2|MRPL14|MRPL53|MRPS18A|MRPS18B|PPIL1|RIOK1|RPL7L1|RPP21|RPP40|RRP36|SF3B5|SNRNP48|SNRPC|WDR46|XPO5
maturation of SSU-rRNA [GoID:GO:0030490; evidenceTypes:IBA|IEA|IMP|ISS]	0		1.72749765312e-05	5	1.23410060874e-05	RPS14|RPS16|RPS19|RPS28|RPSA	5	2.22089469749e-05	ABT1|BYSL|RIOK1|RRP36|WDR46
maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [GoID:GO:0000462; evidenceTypes:IBA|IEA|IMP|ISS]	0		6.26270506922e-05	4	5.41277795529e-05	RPS14|RPS16|RPS19|RPSA	4	7.11263218315e-05	ABT1|BYSL|RRP36|WDR46
ncRNA metabolic process [GoID:GO:0034660; evidenceTypes:EXP|IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.000159892576922	47	1.70252767155e-44	FBL|METTL2B|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	12	0.000319785153844	ABT1|BYSL|EEF1E1|FARS2|RIOK1|RPL7L1|RPP21|RPP40|RRP36|TAF11|WDR46|XPO5
ncRNA processing [GoID:GO:0034470; evidenceTypes:EXP|IBA|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.000463817360793	47	7.37270005432e-52	FBL|METTL2B|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	9	0.000927634721587	ABT1|BYSL|FARS2|RIOK1|RPL7L1|RPP21|RPP40|RRP36|WDR46
nucleolus [GoID:GO:0005730; evidenceTypes:IBA|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000101880732728	19	5.34251155463e-07	EIF3L|FBL|MYC|RPL11|RPL18|RPL26|RPL35|RPS3|RPS6|RPS7|RPS9|RPS10|RPS13|RPS14|RPS19|RPS25|RPS27A|RSL1D1|VPS51	17	0.000203227214301	ABT1|BYSL|C6ORF89|DAXX|EEF1E1|MAD2L1BP|NOL7|NUP153|PAK1IP1|POLR1C|RPL7L1|RPP21|RPP40|RRP36|TRIM27|WDR46|ZNRD1
rRNA metabolic process [GoID:GO:0016072; evidenceTypes:EXP|IBA|IC|IDA|IEA|IGI|IMP|ISS|NAS|TAS]	0		0.000203574498999	46	5.96205686594e-57	FBL|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	8	0.000407148997999	ABT1|BYSL|RIOK1|RPL7L1|RPP21|RPP40|RRP36|WDR46
rRNA processing [GoID:GO:0006364; evidenceTypes:EXP|IBA|IDA|IEA|IMP|ISS|NAS|TAS]	0		7.37805216955e-05	46	9.19814345353e-60	FBL|RPL6|RPL9|RPL10A|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	8	0.000147561043391	ABT1|BYSL|RIOK1|RPL7L1|RPP21|RPP40|RRP36|WDR46
ribonucleoprotein complex [GoID:GO:1990904; evidenceTypes:IBA|IC|IDA|IEA|IMP|IPI|ISS|NAS|TAS]	0		6.5083895039e-07	50	1.89421808755e-41	EEF2|EIF4B|FBL|RPL6|RPL9|RPL10A|RPL10L|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL36A-HNRNPH2|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	19	1.30167790078e-06	ABCF1|CDC5L|DHX16|LSM2|MRPL14|MRPL53|MRPS18A|MRPS18B|PPIL1|RIOK1|RPL7L1|RPP21|RPP40|RRP36|SF3B5|SNRNP48|SNRPC|WDR46|XPO5
ribonucleoprotein complex biogenesis [GoID:GO:0022613; evidenceTypes:EXP|IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		0.000383514617714	49	4.48306791785e-52	EIF3D|EIF4B|FBL|RPL6|RPL9|RPL10A|RPL10L|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	10	0.000767029235429	ABT1|BYSL|PAK1IP1|RIOK1|RPL7L1|RPP21|RPP40|RRP36|SNRPC|WDR46
ribosomal small subunit biogenesis [GoID:GO:0042274; evidenceTypes:IBA|IDA|IEA|IMP|ISS]	0		3.38098072919e-05	11	1.62640858246e-13	RPS5|RPS6|RPS7|RPS10|RPS14|RPS16|RPS17|RPS19|RPS27|RPS28|RPSA	5	6.76196144212e-05	ABT1|BYSL|RIOK1|RRP36|WDR46
ribosome biogenesis [GoID:GO:0042254; evidenceTypes:EXP|IBA|IC|IDA|IEA|IMP|ISS|NAS|TAS]	0		8.955865712e-05	47	1.51434448373e-56	FBL|RPL6|RPL9|RPL10A|RPL10L|RPL11|RPL12|RPL14|RPL15|RPL18|RPL18A|RPL21|RPL22|RPL24|RPL26|RPL27|RPL28|RPL29|RPL31|RPL34|RPL35|RPL35A|RPL37|RPL39|RPLP0|RPLP1|RPS3|RPS5|RPS6|RPS7|RPS9|RPS10|RPS12|RPS13|RPS14|RPS15A|RPS16|RPS17|RPS19|RPS25|RPS27|RPS27A|RPS28|RPS29|RPSA|RSL1D1|UBA52	9	0.00017911731424	ABT1|BYSL|PAK1IP1|RIOK1|RPL7L1|RPP21|RPP40|RRP36|WDR46
